STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0947KEGG: fra:Francci3_3127 conserved hypothetical protein. (68 aa)    
Predicted Functional Partners:
Acel_0996
KEGG: sma:SAV6107 hypothetical protein.
  
     0.705
Acel_2108
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO3975 regulator.
  
     0.667
Acel_1352
KEGG: sma:SAV6829 secreted protein.
  
     0.585
Acel_0754
KEGG: fra:Francci3_1217 conserved hypothetical protein.
  
     0.546
Acel_1755
KEGG: fra:Francci3_0770 hypothetical protein.
  
     0.506
Acel_0585
KEGG: tfu:Tfu_0565 hypothetical protein.
  
     0.486
Acel_1840
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: tfu:Tfu_0591 hypothetical protein.
  
     0.463
Acel_0981
KEGG: tfu:Tfu_1035 hypothetical protein.
  
     0.452
Acel_0391
PFAM: 2',5' RNA ligase; KEGG: fra:Francci3_0662 2',5' RNA ligase.
  
     0.440
Acel_1180
KEGG: sma:SAV6672 putative RecB family exonuclease.
  
     0.431
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.