STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0950Phage shock protein A, PspA; PFAM: Snf7; PspA/IM30 family protein; KEGG: sco:SCO2168 putative phage shock protein A. (263 aa)    
Predicted Functional Partners:
Acel_0951
KEGG: fra:Francci3_2229 conserved hypothetical protein.
 
     0.957
Acel_0953
KEGG: sma:SAV6002 hypothetical protein.
 
     0.950
htpX
Heat shock protein; PFAM: peptidase M48, Ste24p; KEGG: fra:Francci3_2230 peptidase M48, Ste24p; Metallo peptidase; MEROPS family M48B; Belongs to the peptidase M48B family.
 
    0.886
Acel_0954
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: nfa:nfa17050 hypothetical protein; Belongs to the HesB/IscA family.
       0.613
Acel_0461
KEGG: sma:SAV5044 secreted protein.
  
     0.556
Acel_2100
KEGG: pfl:PFL_3824 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
    
 
 0.549
Acel_0024
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sma:SAV4343 hypothetical protein.
  
   
 0.524
Acel_1467
PFAM: protein of unknown function DUF1707; KEGG: cjk:jk1672 hypothetical protein.
  
     0.518
Acel_1419
KEGG: sco:SCO5843 hypothetical protein.
  
     0.482
Acel_0949
KEGG: sco:SCO2169 integral membrane protein.
       0.461
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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