STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0960KEGG: gsu:GSU1251 BNR repeat domain protein. (449 aa)    
Predicted Functional Partners:
Acel_0279
NADH dehydrogenase subunit M; KEGG: tfu:Tfu_2683 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
 
 0.908
Acel_1389
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV3319 subtilisin-like protease.
 
 
 0.765
Acel_0024
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sma:SAV4343 hypothetical protein.
  
 
  0.674
Acel_0023
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3061 FHA domain protein.
  
 
  0.663
Acel_1904
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase.
  
 
 0.648
Acel_1226
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
  
 
  0.647
Acel_1777
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sco:SCO5178 putative sulfurylase.
 
 
 0.639
Acel_1741
FHA domain containing protein; PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: fra:Francci3_0412 cell divisionFtsK/SpoIIIE.
  
  0.605
Acel_1439
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sco:SCO7475 putative phenylacetic acid degradation NADH oxidoreductase PaaE.
   
   0.595
Acel_1409
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sco:SCO6995 protease.
   
 
 0.588
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.