STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0972PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_3098 glycosyl transferase, group 1. (379 aa)    
Predicted Functional Partners:
Acel_0370
TIGRFAM: chorismate mutase; KEGG: mbo:Mb0973c hypothetical protein.
  
     0.641
Acel_1354
PFAM: lipid A biosynthesis acyltransferase; KEGG: tfu:Tfu_2102 lipid A biosynthesis lauroyl acyltransferase.
 
   
 0.586
Acel_1990
PFAM: alpha/beta hydrolase fold; KEGG: fra:Francci3_4293 alpha/beta hydrolase fold.
  
    0.585
Acel_1352
KEGG: sma:SAV6829 secreted protein.
 
     0.572
Acel_0444
UDP-sulfoquinovose synthase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: noc:Noc_1509 UDP-sulfoquinovose synthase.
  
 
  0.556
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.554
Acel_0971
PFAM: NLP/P60 protein; KEGG: pac:PPA0721 putative NPL/P60 family secreted protein.
       0.551
Acel_1374
Maltooligosyl trehalose hydrolase; KEGG: sco:SCO6078 alpha amylase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
   
 0.541
Acel_1610
PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_3101 hypothetical protein.
  
     0.489
Acel_0561
PFAM: diacylglycerol kinase, catalytic region; KEGG: sco:SCO5241 hypothetical protein.
  
    0.480
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.