STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0975PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_0798 response regulator receiver domain protein. (423 aa)    
Predicted Functional Partners:
Acel_1982
PFAM: type II secretion system protein E; KEGG: tfu:Tfu_0128 pilus assembly protein CpaF.
  
 0.899
Acel_1739
PFAM: type II secretion system protein E; KEGG: fra:Francci3_0779 type II secretion system protein E.
  
 0.895
Acel_1737
PFAM: type II secretion system protein; KEGG: fra:Francci3_0781 type II secretion system protein.
 
  
 0.878
Acel_1738
PFAM: type II secretion system protein; KEGG: fra:Francci3_0780 type II secretion system protein.
 
  
 0.807
Acel_0973
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: sco:SCO5455 two-component system response regulator.
  
    0.774
Acel_0974
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sth:STH650 two-component system sensor kinase.
       0.773
Acel_0976
PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV6069 putative acyl-CoA synthetase, long-chain-fatty-acid:CoA ligase.
       0.741
Acel_0157
KEGG: tfu:Tfu_0369 hypothetical protein.
  
  
 0.712
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
  
  
 0.627
Acel_1978
KEGG: sco:SCO3552 hypothetical protein.
  
  
 0.626
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.