STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0980PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sco:SCO2125 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Acel_1138
TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: sma:SAV6329 putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.828
Acel_0979
Glucokinase; TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; KEGG: fra:Francci3_3092 glucokinase ROK.
      0.728
Acel_1974
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sma:SAV4615 anti-sigma factor.
 
    0.635
Acel_2108
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO3975 regulator.
 
    0.479
Acel_2019
KEGG: tfu:Tfu_0026 hypothetical protein.
  
     0.452
Acel_0185
KEGG: sco:SCO6693 hypothetical protein.
 
    0.433
Acel_0922
Hypothetical protein; KEGG: sco:SCO2233 integral membrane protein.
 
    0.430
Acel_0547
KEGG: tfu:Tfu_0551 putative lipoprotein.
  
     0.424
Acel_0245
KEGG: sma:SAV5282 hypothetical protein.
 
   
 0.420
Acel_0978
KEGG: cme:CMN088C hypothetical protein, conserved Pfam: MFS_1 PROSITE: ALA_RICH THR_RICH.
       0.410
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.