STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0986PFAM: protein of unknown function RIO1; protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sma:SAV6092 putative eukaryotic-type serine/threonine protein kinase. (612 aa)    
Predicted Functional Partners:
Acel_1226
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
 
 
 
 0.991
Acel_0022
PFAM: protein phosphatase 2C domain protein; KEGG: mpa:MAP0021c Ppp.
 
 0.988
Acel_0024
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: sma:SAV4343 hypothetical protein.
 
 
 
 0.985
Acel_0023
PFAM: Forkhead-associated protein; KEGG: tfu:Tfu_3061 FHA domain protein.
 
 
 
 0.978
Acel_1741
FHA domain containing protein; PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: fra:Francci3_0412 cell divisionFtsK/SpoIIIE.
  
 
 0.973
Acel_0395
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3065 tyrosine protein kinase:serine/threonine protein kinase.
 
 
0.776
rsgA
GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.634
Acel_1027
PFAM: DivIVA family protein; KEGG: tfu:Tfu_1118 hypothetical protein.
  
 
 0.628
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
    0.615
Acel_0021
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: cell cycle protein; KEGG: nfa:nfa830 putative cell division protein; Belongs to the SEDS family.
 
 
 0.614
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.