STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_0999PFAM: protein of unknown function DUF58; KEGG: sco:SCO2095 hypothetical protein. (422 aa)    
Predicted Functional Partners:
Acel_0998
PFAM: transglutaminase domain protein; KEGG: sma:SAV6110 hypothetical protein.
    0.960
Acel_1000
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: sma:SAV6112 putative regulatory protein.
  
 0.897
Acel_0661
PFAM: transglutaminase domain protein; KEGG: fra:Francci3_1403 transglutaminase-like.
 
    0.618
Acel_1585
PFAM: regulatory protein, AsnC/Lrp family; KEGG: fra:Francci3_3611 putative transcriptional regulator, AsnC family.
  
     0.537
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
     
 0.483
Acel_1303
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: sma:SAV6861 DNA-binding protein.
  
     0.440
Acel_0659
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: tma:TM1132 moxR protein, putative.
  
 0.435
Acel_0660
PFAM: protein of unknown function DUF58; KEGG: lxx:Lxx12070 hypothetical protein.
  
     0.408
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.