STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1015PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding. (389 aa)    
Predicted Functional Partners:
Acel_1017
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: fra:Francci3_4498 oxidoreductase FAD/NAD(P)-binding.
  
 0.992
Acel_1016
PFAM: cyclic nucleotide-binding; KEGG: fra:Francci3_4499 cyclic nucleotide-binding domain (cNMP-BD) protein.
 
     0.954
Acel_1018
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: fra:Francci3_4497 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
   
 0.923
Acel_1019
PFAM: nickel-dependent hydrogenase, large subunit; KEGG: fra:Francci3_4496 nickel-dependent hydrogenase, large subunit.
 
   
 0.923
Acel_1020
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein.
 
   
 0.922
Acel_1021
Hypothetical protein; KEGG: dvu:DVU2292 hydrogenase nickel insertion protein HypA.
       0.580
Acel_1013
PFAM: protein of unknown function DUF152; KEGG: sco:SCO2081 conserved hypothetical protein.
       0.461
Acel_1022
PFAM: protein of unknown function DUF6, transmembrane; KEGG: mta:Moth_1215 protein of unknown function DUF6, transmembrane.
       0.451
Acel_1023
Hypothetical protein.
       0.442
Acel_1014
Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.441
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.