STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1017PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: fra:Francci3_4498 oxidoreductase FAD/NAD(P)-binding. (249 aa)    
Predicted Functional Partners:
Acel_1018
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: fra:Francci3_4497 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
  
 0.995
Acel_1019
PFAM: nickel-dependent hydrogenase, large subunit; KEGG: fra:Francci3_4496 nickel-dependent hydrogenase, large subunit.
 
  
 0.995
Acel_1015
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding.
  
 0.992
pyrD
Dihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.974
Acel_1020
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein.
 
    0.950
Acel_0059
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: tfu:Tfu_2719 thiosulfate sulfurtransferase.
     
 0.904
Acel_1417
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: sco:SCO5854 thiosulfate sulfurtransferase.
     
 0.904
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
  0.902
Acel_0523
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afu:AF0557 flavoprotein reductase.
   
 
  0.901
Acel_1016
PFAM: cyclic nucleotide-binding; KEGG: fra:Francci3_4499 cyclic nucleotide-binding domain (cNMP-BD) protein.
 
     0.880
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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