STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Acel_1087PFAM: GCN5-related N-acetyltransferase; KEGG: tvo:TVN0769 predicted acetyltransferase. (208 aa)    
Predicted Functional Partners:
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
 
 0.653
Acel_2014
KEGG: sma:SAV4558 hypothetical protein.
  
     0.611
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
   0.561
Acel_1734
KEGG: fra:Francci3_0784 hypothetical protein.
  
     0.546
gpsA
PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: sma:SAV2680 putative glycerol-3-phosphate dehydrogenase, NAD(P)H-dependent.
    
   0.545
Acel_1752
KEGG: fra:Francci3_0773 ATPases involved in chromosome partitioning-like.
  
     0.515
Acel_0391
PFAM: 2',5' RNA ligase; KEGG: fra:Francci3_0662 2',5' RNA ligase.
 
     0.466
Acel_0942
KEGG: sco:SCO2325 integral membrane protein.
  
     0.441
Acel_1597
Serine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tfu:Tfu_2200 protein phosphatase 2C-like.
  
     0.430
Acel_0947
KEGG: fra:Francci3_3127 conserved hypothetical protein.
  
     0.425
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.