STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1096PFAM: glutamine synthetase, catalytic region; KEGG: mja:MJ1346 glutamine synthetase (GlnA). (449 aa)    
Predicted Functional Partners:
Acel_1078
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin).
  
 
 0.965
Acel_1749
PFAM: NAD-glutamate dehydrogenase; KEGG: sma:SAV5075 NAD-glutamate dehydrogenase.
     
 0.923
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.914
Acel_0556
Glutamine--fructose-6-phosphate transaminase; PFAM: sugar isomerase (SIS); KEGG: ccr:CC0444 SIS domain protein.
  
 
 0.914
Acel_0637
PFAM: protein of unknown function DUF201; KEGG: cac:CAC2189 hypothetical protein.
  
 0.914
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: tfu:Tfu_1057 carbamoyl-phosphate synthase, large subunit, glutamine-dependent; Belongs to the CarB family.
  
 0.914
Acel_1744
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fra:Francci3_0794 nitrite reductase (NAD(P)H) large subunit, NirB.
    
 0.912
carA
KEGG: sma:SAV6866 putative carbamoyl-phosphate synthase subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; Belongs to the CarA family.
  
 
 0.911
Acel_1743
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: dge:Dgeo_2392 nitrite reductase (NAD(P)H) large subunit, NirD.
     
 0.910
Acel_1079
TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tfu:Tfu_1174 glutamate synthase, NADH/NADPH, small subunit 1.
  
 
 0.909
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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