STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1097PFAM: Acetoacetate decarboxylase; KEGG: nar:Saro_2597 acetoacetate decarboxylase. (275 aa)    
Predicted Functional Partners:
Acel_1098
Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: bld:BLi00667 YwaE.
 
     0.909
Acel_1095
PFAM: cytochrome P450; KEGG: nar:Saro_2608 cytochrome P450 family protein.
 
     0.861
Acel_1101
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: bte:BTH_II0234 class III extradiol-type catecholic dioxygenase, putative.
 
     0.822
Acel_1096
PFAM: glutamine synthetase, catalytic region; KEGG: mja:MJ1346 glutamine synthetase (GlnA).
 
     0.799
Acel_1103
KEGG: mba:Mbar_A1947 hypothetical protein.
 
     0.783
Acel_1105
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: nfa:nfa27870 putative permease; TC 2.A.3.
  
     0.712
Acel_1102
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: nar:Saro_2598 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
 
     0.687
Acel_1094
PFAM: glutamine amidotransferase class-I; KEGG: tel:tll1969 probable amino transferase.
  
     0.519
Acel_2093
Exonuclease; KEGG: mca:MCA0877 exonuclease.
 
     0.484
Acel_1383
PFAM: protein of unknown function DUF6, transmembrane; KEGG: sco:SCO1313 integral membrane protein.
  
     0.479
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.