Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1099PFAM: peptidase C26; KEGG: mta:Moth_2164 peptidase C26. (243 aa)    
Predicted Functional Partners:
Acel_1101
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: bte:BTH_II0234 class III extradiol-type catecholic dioxygenase, putative.
 
     0.661
Acel_1100
PFAM: aldehyde dehydrogenase; KEGG: nar:Saro_2610 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.555
Acel_1102
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: nar:Saro_2598 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
       0.542
Acel_1103
KEGG: mba:Mbar_A1947 hypothetical protein.
       0.458
Acel_1104
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1609 ferredoxin reductase.
       0.458
Acel_1851
PFAM: glutamine synthetase, catalytic region; KEGG: sma:SAV6725 putative glutamine synthetase.
 
  
 0.454
Acel_1105
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: nfa:nfa27870 putative permease; TC 2.A.3.
 
    0.433
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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