STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1102PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: nar:Saro_2598 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (290 aa)    
Predicted Functional Partners:
Acel_1101
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: bte:BTH_II0234 class III extradiol-type catecholic dioxygenase, putative.
 
  
 0.944
Acel_1100
PFAM: aldehyde dehydrogenase; KEGG: nar:Saro_2610 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.859
Acel_1103
KEGG: mba:Mbar_A1947 hypothetical protein.
 
     0.736
Acel_1097
PFAM: Acetoacetate decarboxylase; KEGG: nar:Saro_2597 acetoacetate decarboxylase.
 
     0.687
Acel_1104
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sma:SAV1609 ferredoxin reductase.
     
 0.648
Acel_1099
PFAM: peptidase C26; KEGG: mta:Moth_2164 peptidase C26.
       0.545
Acel_1105
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: amino acid permease-associated region; KEGG: nfa:nfa27870 putative permease; TC 2.A.3.
 
 
   0.535
Acel_1095
PFAM: cytochrome P450; KEGG: nar:Saro_2608 cytochrome P450 family protein.
  
  
 0.495
Acel_1098
Transcriptional regulator, MarR family; PFAM: regulatory protein, MarR; KEGG: bld:BLi00667 YwaE.
  
     0.443
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.