STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1133PFAM: cytochrome oxidase assembly; KEGG: sma:SAV6320 putative integral membrane transport protein. (370 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.994
Acel_0963
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.
 
  
 0.778
Acel_0962
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO2149 Rieske iron-sulfur protein.
  
  
 0.774
Acel_0961
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: tfu:Tfu_1019 ubiquinol-cytochrome c reductase, cytochrome b subunit.
 
   
 0.761
Acel_1134
Transcriptional regulator; KEGG: tfu:Tfu_1988 putative DNA-binding protein.
       0.634
Acel_1135
Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: tfu:Tfu_1987 Fes assembly protein SufB.
       0.613
Acel_1136
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: sma:SAV6326 putative iron-regulated ABC-type transporter.
       0.613
Acel_0958
Putative integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.600
Acel_1986
PFAM: electron transport protein SCO1/SenC; KEGG: bbr:BB4821 SCO1/SenC family protein.
  
 
 0.594
Acel_0964
PFAM: cytochrome c oxidase, subunit III; KEGG: fra:Francci3_3108 heme/copper-type cytochrome/quinol oxidase subunit 3-like.
 
  
 0.588
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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