Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1135Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: tfu:Tfu_1987 Fes assembly protein SufB. (470 aa)    
Predicted Functional Partners:
Acel_1137
KEGG: sco:SCO1922 putative ABC transporter ATP-binding subunit; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
Acel_1138
TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: sma:SAV6329 putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.997
Acel_1134
Transcriptional regulator; KEGG: tfu:Tfu_1988 putative DNA-binding protein.
  
  
 0.953
Acel_1139
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: fra:Francci3_1665 SUF system FeS assembly protein.
 
  
 0.953
Acel_1136
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: sma:SAV6326 putative iron-regulated ABC-type transporter.
 
   
0.910
Acel_1140
PFAM: protein of unknown function DUF59; KEGG: sma:SAV6331 hypothetical protein.
     
 0.685
Acel_1133
PFAM: cytochrome oxidase assembly; KEGG: sma:SAV6320 putative integral membrane transport protein.
       0.621
Acel_0688
PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sma:SAV2756 putative pyridoxal-phosphate-dependent aminotransferase.
  
  
 0.508
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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