STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1179PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa46550 putative ABC transporter ATP-binding protein. (253 aa)    
Predicted Functional Partners:
Acel_1178
PFAM: protein of unknown function DUF214; KEGG: fra:Francci3_2636 protein of unknown function DUF214.
 
 
 0.993
Acel_1452
PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3655 hypothetical protein.
 
 0.983
Acel_1627
PFAM: protein of unknown function DUF214; KEGG: lxx:Lxx22040 putative ABC transporter permease protein.
 
 0.951
Acel_2039
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.716
Acel_1450
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sth:STH975 hypothetical protein.
 
 0.676
Acel_0929
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4867 putative ABC transporter ATP-binding protein.
 
   
0.639
Acel_0930
KEGG: sma:SAV4866 hypothetical protein.
   
 
 0.636
Acel_0339
KEGG: fra:Francci3_1472 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
0.489
Acel_1176
KEGG: sma:SAV3274 hypothetical protein.
       0.479
Acel_1177
KEGG: eba:ebA2473 hypothetical gene.
       0.479
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.