STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1230PFAM: protein of unknown function DUF881; KEGG: sco:SCO1387 membrane associated protein. (301 aa)    
Predicted Functional Partners:
Acel_1229
PFAM: protein of unknown function DUF1290; KEGG: sco:SCO1386 integral membrane protein.
 
    0.978
Acel_1228
PFAM: protein of unknown function DUF881; KEGG: mpa:MAP1538 hypothetical protein.
 
    
0.832
Acel_1231
Nucleotidyltransferase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: tfu:Tfu_1394 mannose-1-phosphate guanylyltransferase.
       0.805
Acel_1232
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tfu:Tfu_1393 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.805
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.640
Acel_0177
G5 domain protein; PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: sco:SCO3150 hypothetical protein.
  
     0.592
Acel_1224
PFAM: protein of unknown function DUF151; KEGG: sco:SCO1382 hypothetical protein.
     
 0.585
Acel_1226
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain containing protein.
       0.542
Acel_1225
Transcriptional regulator, MerR family; PFAM: regulatory protein, MerR; KEGG: sma:SAV6982 hypothetical protein.
       0.529
Acel_0155
KEGG: fra:Francci3_0065 hypothetical protein.
  
     0.526
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.