STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1283TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 1; KEGG: tfu:Tfu_0281 putative polyamine-binding lipoprotein. (420 aa)    
Predicted Functional Partners:
Acel_1281
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0283 polyamine ABC-transporter, inner membrane subunit.
 
 0.999
Acel_1282
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0282 polyamine ABC-transporter, inner membrane subunit.
 
 
 0.998
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.996
Acel_1280
PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2058 hypothetical protein.
 
   
 0.931
Acel_2038
PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: sma:SAV1721 putative ABC transporter ATP-binding protein.
  
 0.782
Acel_1286
PFAM: regulatory protein, AsnC/Lrp family; KEGG: fra:Francci3_3779 transcriptional regulator, AsnC family.
 
     0.665
Acel_1287
PFAM: aminotransferase class-III; KEGG: tfu:Tfu_0278 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.640
Acel_1285
PFAM: aldehyde dehydrogenase; KEGG: fra:Francci3_3777 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.627
Acel_1044
Transcriptional regulator, XRE family with cupin sensor; PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: sil:SPO0423 DNA-binding protein, putative.
 
   
 0.514
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.461
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.