Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1315KEGG: pcu:pc0938 hypothetical protein. (535 aa)    
Predicted Functional Partners:
Acel_1316
TIGRFAM: Prepilin-type cleavage/methylation-like.
  
  
 0.897
Acel_1317
TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: spn:SP1772 cell wall surface anchor family protein.
  
  
 0.895
Acel_1314
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
     
 0.765
Acel_1311
Hypothetical protein; KEGG: dme:CG7803-PA CG7803 gene product from transcript CG7803-RA.
  
  
 0.581
Acel_1313
TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA; KEGG: gme:Gmet_0971 type IV pilus assembly protein PilM.
     
 0.580
Acel_1318
Secretory protein; KEGG: tel:tll1011 pilin polypeptide PilA homolog.
     
 0.479
Acel_1312
PFAM: Fimbrial assembly family protein.
       0.415
Acel_1310
KEGG: ddi:DDB0190773 hypothetical protein.
       0.403
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.400
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.400
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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