STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1321Twitching motility protein; KEGG: dsy:DSY2385 hypothetical protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase. (362 aa)    
Predicted Functional Partners:
Acel_1320
PFAM: type II secretion system protein; KEGG: gsu:GSU1493 type IV pilus biogenesis protein PilC.
 
  
 0.958
Acel_1314
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.855
Acel_1313
TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA; KEGG: gme:Gmet_0971 type IV pilus assembly protein PilM.
 
   
 0.804
Acel_1318
Secretory protein; KEGG: tel:tll1011 pilin polypeptide PilA homolog.
 
   
 0.768
Acel_1319
Secretory protein; KEGG: chy:CHY_0633 general secretion pathway protein G.
 
   
 0.700
Acel_1311
Hypothetical protein; KEGG: dme:CG7803-PA CG7803 gene product from transcript CG7803-RA.
  
  
 0.421
Acel_0165
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; histidine kinase, HAMP region domain protein; KEGG: ade:Adeh_2704 diguanylate cyclase (GGDEF domain).
  
  
 0.401
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.