STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1322PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: mta:Moth_1554 type II secretion system protein E. (553 aa)    
Predicted Functional Partners:
Acel_1320
PFAM: type II secretion system protein; KEGG: gsu:GSU1493 type IV pilus biogenesis protein PilC.
 
 0.944
Acel_1314
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.842
Acel_1318
Secretory protein; KEGG: tel:tll1011 pilin polypeptide PilA homolog.
 
 
 0.718
Acel_1319
Secretory protein; KEGG: chy:CHY_0633 general secretion pathway protein G.
 
 
 0.691
Acel_1313
TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA; KEGG: gme:Gmet_0971 type IV pilus assembly protein PilM.
 
 
 
 0.631
Acel_1323
TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function, ATP binding; KEGG: aae:aq_1844 hypothetical protein.
     
 0.536
Acel_1324
KEGG: ade:Adeh_3642 hypothetical protein.
       0.466
Acel_0773
PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: nfa:nfa13820 putative DNA-binding protein.
  
  
 0.453
Acel_1620
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tfu:Tfu_3094 single-strand binding protein.
  
  
 0.437
Acel_2132
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tfu:Tfu_3094 single-strand binding protein.
  
  
 0.437
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.