STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1363PFAM: Glycosyl hydrolase family 32, N terminal domain protein; KEGG: rba:RB5832 hypothetical protein. (331 aa)    
Predicted Functional Partners:
Acel_0133
Broad-specificity cellobiase; PFAM: glycoside hydrolase, family 1; KEGG: sco:SCO7558 putative beta-glucosidase.
   
 
 0.912
Acel_2120
PFAM: PfkB domain protein; KEGG: tfu:Tfu_0928 fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.912
Acel_1659
Beta-glucosidase; PFAM: glycoside hydrolase, family 3 domain protein; KEGG: aor:AO090010000034 beta-glucosidase-related glycosidases.
   
 
  0.900
Acel_1362
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH01557 probable sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
     0.634
Acel_1361
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_CH01556 probable sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
    0.627
Acel_1360
PFAM: extracellular solute-binding protein, family 1; KEGG: ret:RHE_PB00115 putative sugar ABC transporter, substrate-binding protein; TC 3.A.1.1.-.
 
     0.576
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.