Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1369PFAM: sporulation and cell division protein SsgA; KEGG: sco:SCO1541 regulator. (128 aa)    
Predicted Functional Partners:
Acel_0065
KEGG: sma:SAV4026 AmfC protein.
  
   
 0.791
Acel_1303
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: sma:SAV6861 DNA-binding protein.
  
   
 0.789
Acel_1141
KEGG: sco:SCO1839 transcriptional regulator.
  
   
 0.741
Acel_0017
KEGG: sco:SCO3852 hypothetical protein.
  
     0.733
Acel_0792
KEGG: sma:SAV5589 hypothetical protein.
  
     0.732
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
  
     0.702
Acel_2009
Acylaminoacyl-peptidase; PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: sma:SAV4564 peptidase.
  
     0.642
Acel_0996
KEGG: sma:SAV6107 hypothetical protein.
  
     0.622
Acel_1599
KEGG: fra:Francci3_1159 hypothetical protein.
  
     0.598
Acel_0565
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: sco:SCO5244 anti-sigma factor.
  
     0.593
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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