STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1377PFAM: ROK family protein; KEGG: spr:spr0584 glucose kinase. (346 aa)    
Predicted Functional Partners:
Acel_0573
Glucokinase; PFAM: ROK family protein; KEGG: mta:Moth_0832 glucokinase ROK.
  
  
 
0.929
Acel_0979
Glucokinase; TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; KEGG: fra:Francci3_3092 glucokinase ROK.
  
  
 
0.925
Acel_1611
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.915
Acel_1125
PFAM: phosphoglucose isomerase (PGI); KEGG: tfu:Tfu_2004 glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.908
Acel_0467
PFAM: sugar isomerase (SIS); KEGG: fra:Francci3_0753 conserved hypothetical protein.
    
  0.903
Acel_1674
PFAM: Aldose 1-epimerase; KEGG: blo:BL1360 hypothetical protein in aldose epimerase family.
    
 0.903
Acel_2138
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; KEGG: tfu:Tfu_3099 myo-inositol-1-phosphate synthase.
     
  0.900
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.825
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.817
xylA
Xylose isomerase; KEGG: sma:SAV7182 putative xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
    
 0.817
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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