STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1387Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mag:amb3665 signal transduction histidine kinase. (367 aa)    
Predicted Functional Partners:
Acel_0365
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sma:SAV4998 two-component system response regulator.
 
   0.861
Acel_0518
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: tfu:Tfu_3035 regulatory protein, LuxR:response regulator receiver.
 
   0.861
Acel_1760
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; Sigma-70, region 4 type 2; KEGG: fra:Francci3_0765 two component transcriptional regulator, LuxR family.
 
   0.861
Acel_1390
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sma:SAV2230 two-component system response regulator.
 
   0.860
Acel_0973
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: sco:SCO5455 two-component system response regulator.
 
   0.859
Acel_0195
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: sma:SAV5868 two-component system response regulator.
 
   0.853
Acel_0262
PFAM: response regulator receiver; KEGG: fra:Francci3_0524 response regulator receiver protein.
 
   0.779
Acel_1389
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV3319 subtilisin-like protease.
  
    0.779
Acel_0974
Putative signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sth:STH650 two-component system sensor kinase.
  
     0.775
Acel_1388
Hypothetical protein.
       0.773
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.