STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1389PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV3319 subtilisin-like protease. (585 aa)    
Predicted Functional Partners:
Acel_0960
KEGG: gsu:GSU1251 BNR repeat domain protein.
 
 
 0.800
Acel_1387
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mag:amb3665 signal transduction histidine kinase.
  
    0.778
Acel_1388
Hypothetical protein.
       0.773
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.680
Acel_1409
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sco:SCO6995 protease.
  
     0.635
Acel_1741
FHA domain containing protein; PFAM: Forkhead-associated protein; cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: fra:Francci3_0412 cell divisionFtsK/SpoIIIE.
  
 
 0.543
Acel_1702
KEGG: sco:SCO6705 secreted protein.
 
 
 0.507
Acel_0173
KEGG: sma:SAV1698 hypothetical protein.
 
 
 0.492
Acel_0725
PFAM: glycosyl transferase, family 2; KEGG: efa:EF2180 glycosyl transferase, group 2 family protein.
  
 
 0.488
Acel_1545
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sco:SCO4332 putative integral membrane ATPase.
   
 
 0.486
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.