Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1399PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: sma:SAV2392 putative potassium transporter. (233 aa)    
Predicted Functional Partners:
Acel_1398
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: sco:SCO5876 potassium uptake protein.
 
  
0.758
Acel_1400
PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: sma:SAV2394 hypothetical protein.
  
    0.740
Acel_1277
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sma:SAV6878 putative RNA-binding Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.703
Acel_1397
Amino acid/polyamine/organocation transporter, APC superfamily; KEGG: sco:SCO5900 probable membrane protein; TC 2.A.3.
 
     0.661
Acel_0472
PFAM: molybdopterin biosynthesis MoaE; KEGG: fra:Francci3_3785 molybdopterin biosynthesis MoaE.
   
    0.579
Acel_0236
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: sma:SAV4741 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase.
  
    0.473
Acel_1396
23S rRNA m(5)U-1939 methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; conserved hypothetical protein 95; (Uracil-5)-methyltransferase; KEGG: tfu:Tfu_1927 23S rRNA methyltransferase/RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.467
Acel_1742
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: fra:Francci3_0793 uroporphyrinogen III synthase HEM4.
  
    0.450
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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