Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Acel_1414PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV4061 putative ABC transporter ATP-binding protein. (263 aa)    
Predicted Functional Partners:
Acel_1931
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A3370 ABC transporter, ATP-binding protein.
 
    
0.927
Acel_0909
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syf:Synpcc7942_1893 ATPase; TC 3.A.1.4.-.
    
0.905
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
    
0.869
Acel_1415
Hypothetical protein.
       0.773
Acel_1412
Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: sco:SCO6994 hypothetical protein.
       0.686
Acel_1413
Hypothetical protein.
       0.686
Acel_1410
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; KEGG: sco:SCO6996 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.662
Acel_1411
KEGG: sco:SCO6997 hypothetical protein.
       0.662
Acel_1626
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1469 ABC transporter, ATP-binding protein.
  
     0.640
Acel_1416
Hypothetical protein.
       0.550
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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