STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1418PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: tfu:Tfu_2126 hypothetical protein. (412 aa)    
Predicted Functional Partners:
Acel_1419
KEGG: sco:SCO5843 hypothetical protein.
 
     0.845
Acel_1420
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; KEGG: bja:bll0955 hypothetical protein.
       0.594
Acel_1417
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: sco:SCO5854 thiosulfate sulfurtransferase.
       0.582
Acel_1422
PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: tfu:Tfu_2131 DNA gyrase/topoisomerase IV, subunit A.
 
     0.463
Acel_1421
PFAM: peptidase M48, Ste24p; KEGG: tfu:Tfu_2172 hypothetical protein.
  
   0.439
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.