STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1452PFAM: protein of unknown function DUF214; KEGG: dsy:DSY3655 hypothetical protein. (410 aa)    
Predicted Functional Partners:
Acel_1451
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH976 ABC transporter ATP-binding protein.
 0.999
Acel_1626
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1469 ABC transporter, ATP-binding protein.
 
 0.992
Acel_1450
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sth:STH975 hypothetical protein.
 
 
 0.988
Acel_1179
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa46550 putative ABC transporter ATP-binding protein.
 
 0.983
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
    0.900
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
      0.900
Acel_0744
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_0874 ABC transporter related.
 
      0.899
Acel_1131
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV2246 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.
 
      0.892
Acel_2038
PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: sma:SAV1721 putative ABC transporter ATP-binding protein.
 
 
    0.881
Acel_0192
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2305 putative ABC transporter ATP-binding subunit.
 
      0.836
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.