STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1463KEGG: fra:Francci3_4387 putative integral membrane protein. (552 aa)    
Predicted Functional Partners:
Acel_1464
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: sma:SAV7483 hypothetical protein.
       0.773
Acel_1465
PFAM: luciferase family protein; KEGG: sma:SAV7484 N5,N10-methylenetetrahydromethanopterin reductase-related protein.
       0.773
Acel_1466
KEGG: cgl:NCgl1234 hypothetical protein.
       0.471
Acel_1467
PFAM: protein of unknown function DUF1707; KEGG: cjk:jk1672 hypothetical protein.
       0.417
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.