Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1505PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ade:Adeh_3302 FAD dependent oxidoreductase. (527 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
     
 0.776
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.774
Acel_1507
PFAM: peptidase M16 domain protein; KEGG: sco:SCO5738 putative protease; Belongs to the peptidase M16 family.
       0.773
Acel_1693
PFAM: Squalene/phytoene synthase; KEGG: fra:Francci3_0819 squalene/phytoene synthase.
  
  
 0.532
Acel_1694
PFAM: Squalene/phytoene synthase; KEGG: fra:Francci3_0820 squalene/phytoene synthase.
  
  
 0.532
Acel_1952
PFAM: protein of unknown function DUF885; KEGG: xcv:XCV2955 putative secreted protein.
  
     0.475
thyX
Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
       0.461
Acel_0660
PFAM: protein of unknown function DUF58; KEGG: lxx:Lxx12070 hypothetical protein.
  
     0.416
rpsO
SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
       0.414
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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