STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Acel_1532PFAM: oxidoreductase domain protein; KEGG: sma:SAV7015 putative oxidoreductase. (312 aa)    
Predicted Functional Partners:
iolG
Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
  
     0.610
Acel_1531
PFAM: amino acid-binding ACT domain protein; KEGG: fra:Francci3_3646 amino acid-binding ACT.
       0.468
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tfu:Tfu_2881 lysyl-tRNA synthetase, class-2; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.453
Acel_1533
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: gka:GK0081 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
       0.427
Acel_0369
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.
  
     0.422
Acel_1811
PFAM: oxidoreductase domain protein; KEGG: cgb:cg0211 putative oxidoreductase.
  
     0.413
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.