STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1552Transcriptional regulator, SARP family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: sma:SAV3804 transcriptional regulator. (289 aa)    
Predicted Functional Partners:
Acel_1553
KEGG: sma:SAV2634 hypothetical protein.
       0.532
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.532
Acel_1551
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2993 methyltransferase type 12.
 
     0.480
Acel_0141
PFAM: peptidase C60, sortase A and B; KEGG: fra:Francci3_1460 peptidase C60, sortase A and B.
 
     0.427
Acel_0337
KEGG: fra:Francci3_2435 hypothetical protein.
  
     0.424
Acel_0348
PFAM: peptidase C60, sortase A and B; KEGG: fra:Francci3_1460 peptidase C60, sortase A and B.
 
     0.419
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.