STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1610PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_3101 hypothetical protein. (450 aa)    
Predicted Functional Partners:
Acel_1609
PFAM: globin; KEGG: tfu:Tfu_2215 similar to truncated hemoglobins.
  
    0.774
Acel_2137
PFAM: transcriptional regulator PadR family protein; KEGG: sco:SCO3900 hypothetical protein.
 
   
 0.695
Acel_1352
KEGG: sma:SAV6829 secreted protein.
  
    0.635
Acel_1107
KEGG: tfu:Tfu_2201 hypothetical protein.
  
    0.598
Acel_0668
KEGG: mmc:Mmcs_3866 hypothetical protein.
  
    0.556
Acel_0054
KEGG: fra:Francci3_4327 hypothetical protein.
  
     0.534
Acel_1353
Phosphatidylinositol alpha-mannosyltransferase; PFAM: glycosyl transferase, group 1; KEGG: tfu:Tfu_2101 phosphatidyl-myo-inositol alpha-mannosyltransferase.
  
     0.514
Acel_1354
PFAM: lipid A biosynthesis acyltransferase; KEGG: tfu:Tfu_2102 lipid A biosynthesis lauroyl acyltransferase.
  
   
 0.508
Acel_0965
KEGG: tfu:Tfu_1023 putative response regulator.
  
     0.504
Acel_0972
PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_3098 glycosyl transferase, group 1.
  
     0.489
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.