STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1611Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (438 aa)    
Predicted Functional Partners:
Acel_1677
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: sco:SCO3136 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.988
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.925
Acel_0573
Glucokinase; PFAM: ROK family protein; KEGG: mta:Moth_0832 glucokinase ROK.
 
  
 0.918
Acel_1676
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sco:SCO3137 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.916
Acel_0979
Glucokinase; TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; KEGG: fra:Francci3_3092 glucokinase ROK.
 
  
 0.915
Acel_1377
PFAM: ROK family protein; KEGG: spr:spr0584 glucose kinase.
 
  
 0.915
Acel_1674
PFAM: Aldose 1-epimerase; KEGG: blo:BL1360 hypothetical protein in aldose epimerase family.
     
  0.900
Acel_1675
KEGG: nfa:nfa11640 putative galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
  
 
 0.490
Acel_0200
TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: fra:Francci3_4311 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
  
    0.428
Acel_0072
beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20; KEGG: sma:SAV5268 putative beta-N-acetylhexosaminidase.
  
    0.426
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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