STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1613PFAM: thioesterase superfamily protein; KEGG: sco:SCO2676 hypothetical protein. (129 aa)    
Predicted Functional Partners:
Acel_0878
(acyl-carrier-protein) S-malonyltransferase-like protein; KEGG: fra:Francci3_3481 S-malonyltransferase.
 
 
 0.814
Acel_1749
PFAM: NAD-glutamate dehydrogenase; KEGG: sma:SAV5075 NAD-glutamate dehydrogenase.
 
    0.699
Acel_1614
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_2216 ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.696
Acel_0879
Transcriptional regulator, CdaR family; KEGG: sco:SCO2386 hypothetical protein.
  
     0.532
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.508
Acel_0288
KEGG: sco:SCO4636 hypothetical protein; Belongs to the UPF0336 family.
 
   
 0.422
Acel_0289
PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO4637 hypothetical protein.
 
   
 0.421
Acel_0172
PFAM: glycosyl transferase, family 39; KEGG: fra:Francci3_3969 glycosyl transferase, family 39.
  
     0.415
Acel_0868
KEGG: sma:SAV5784 hypothetical protein.
  
     0.414
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.411
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.