STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1633PFAM: purine catabolism PurC domain protein; KEGG: mta:Moth_2125 transcriptional regulator, CdaR. (601 aa)    
Predicted Functional Partners:
Acel_1636
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bpa:BPP0391 hypothetical protein.
 
     0.854
Acel_1638
Carbon-monoxide dehydrogenase (acceptor); PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: ape:APE2219 292aa long hypothetical nicotine dehydrogenase chain A.
 
   
 0.842
Acel_1634
KEGG: mth:MTH1911 hypothetical protein.
 
     0.814
Acel_1635
PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mlo:mlr7936 diaminopropionate ammonia-lyase.
       0.773
Acel_1637
Purine hydroxylase delta subunit apoprotein; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: reu:Reut_A3075 ferredoxin:(2Fe-2S)-binding.
       0.764
Acel_1639
PFAM: Asp/Glu racemase; KEGG: pab:PAB2420 arylmalonate decarboxylase.
       0.712
Acel_1640
KEGG: bja:blr4464 probable ABC transporter ATP-binding/permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMC domain protein; ABC transporter related; SMART: AAA ATPase; TC 3.A.1.3.-; 3.A.1.3.-.
     
 0.557
Acel_1064
KEGG: sco:SCO1219 integral membrane protein.
  
     0.479
Acel_1632
KEGG: gvi:gll0959 hypothetical protein.
       0.411
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.