Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acel_1640KEGG: bja:blr4464 probable ABC transporter ATP-binding/permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMC domain protein; ABC transporter related; SMART: AAA ATPase; TC 3.A.1.3.-; 3.A.1.3.-. (559 aa)    
Predicted Functional Partners:
Acel_1641
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: atc:AGR_pAT_714 putative periplasmic binding transport protein; TC 3.A.1.3.-.
 
 
 0.983
Acel_1078
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fra:Francci3_3013 glutamate synthase (ferredoxin).
  
  
 0.931
argG
PFAM: argininosuccinate synthase; KEGG: tfu:Tfu_2052 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.798
Acel_1118
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1631 ABC transporter, permease protein.
 
  
 0.797
Acel_2039
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.737
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: fra:Francci3_3168 argininosuccinate lyase.
  
  
 0.695
Acel_2089
PFAM: ABC-3 protein; KEGG: fra:Francci3_2476 ABC-3.
 
  
 0.694
Acel_2088
PFAM: ABC-3 protein; KEGG: fra:Francci3_2477 ABC-3.
 
  
 0.672
Acel_2056
PFAM: Na+/solute symporter; KEGG: sco:SCO5229 putative permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.658
Acel_1116
PFAM: extracellular solute-binding protein, family 5; KEGG: sma:SAV874 solute-binding dependent transport lipoprotein.
  
 
 0.655
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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