STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1643PFAM: coenzyme A transferase; KEGG: plu:plu0144 unnamed protein product; similar to glutaconate CoA-transferase chain B. (261 aa)    
Predicted Functional Partners:
Acel_1644
Glutaconate CoA-transferase; PFAM: coenzyme A transferase; KEGG: afu:AF1199 glutaconate CoA-transferase, subunit A.
 0.999
Acel_1645
PFAM: luciferase family protein; KEGG: nfa:nfa26770 hypothetical protein.
 
     0.901
Acel_1602
PFAM: Amidase; KEGG: tfu:Tfu_2207 amidase; Belongs to the amidase family.
     
  0.900
Acel_1642
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: sme:SMb20132 probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane.
       0.773
Acel_0626
KEGG: tfu:Tfu_0875 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.570
Acel_0672
KEGG: tfu:Tfu_2394 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.507
Acel_0586
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; catalytic domain of components of various dehydrogenase complexes; Transketolase, central region; KEGG: tfu:Tfu_0566 2-oxoglutarate dehydrogenase, E1 component.
   
  
 0.505
Acel_1639
PFAM: Asp/Glu racemase; KEGG: pab:PAB2420 arylmalonate decarboxylase.
  
     0.425
Acel_0548
PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gka:GK1599 acetyl-CoA carboxylase.
  
 
 0.424
Acel_1041
PFAM: Cupin 2, conserved barrel domain protein.
 
   
 0.407
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.