STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1664Putative transcriptional regulator; KEGG: mbo:Mb2651 hypothetical protein. (209 aa)    
Predicted Functional Partners:
folE-2
PFAM: GTP cyclohydrolase I; KEGG: nfa:nfa31470 putative GTP cyclohydrolase I.
       0.568
Acel_1134
Transcriptional regulator; KEGG: tfu:Tfu_1988 putative DNA-binding protein.
   
    0.520
Acel_0503
PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: tfu:Tfu_2794 hypothetical protein.
 
     0.471
Acel_0496
KEGG: sco:SCO4689 hypothetical protein.
 
    0.459
Acel_1667
PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: fra:Francci3_4216 transposase IS116/IS110/IS902.
 
     0.459
Acel_1411
KEGG: sco:SCO6997 hypothetical protein.
  
     0.456
Acel_0061
Nickel uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sco:SCO4180 iron uptake regulatory protein; Belongs to the Fur family.
  
    0.424
Acel_1704
PFAM: protein of unknown function DUF179; KEGG: sco:SCO2948 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.424
Acel_2085
Zinc uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sma:SAV5631 putative metal uptake regulation protein; Belongs to the Fur family.
  
    0.424
Acel_2095
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nfa:nfa3250 putative ferric uptake regulator; Belongs to the Fur family.
  
    0.424
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.