STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1718KEGG: sco:SCO6594 secreted protein. (562 aa)    
Predicted Functional Partners:
Acel_1460
PFAM: glycoside hydrolase, family 18; Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase.
 
 
 
 0.818
Acel_0603
PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.800
Acel_1459
PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: sma:SAV3258 chitinase A.
 
  
 0.775
Acel_0129
PFAM: glycoside hydrolase, family 16; Carbohydrate binding family 6; SMART: cellulose binding, type IV; KEGG: sma:SAV1764 endo-1,3-beta-glucanase.
 
     0.738
Acel_2033
Chitinase family 18; PFAM: Carbohydrate-binding, CenC domain protein domain protein; Carbohydrate-binding family V/XII; KEGG: sma:SAV1751 chitinase A.
  
     0.701
Acel_0617
PFAM: glycoside hydrolase, family 48; cellulose-binding, family II; type 3a, cellulose-binding domain protein; Fibronectin, type III domain protein; KEGG: sco:SCO6546 secreted cellulase.
  
     0.699
Acel_1458
PFAM: glycoside hydrolase, family 18; Carbohydrate-binding, CenC domain protein domain protein; SMART: chitinase II; KEGG: sma:SAV3258 chitinase A; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.696
Acel_1719
Hypothetical protein.
       0.682
Acel_0619
PFAM: cellulose-binding, family II; glycoside hydrolase, family 12; KEGG: sma:SAV555 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
   
 0.655
Acel_0402
SMART: Pyrrolo-quinoline quinone; KEGG: spn:SP1772 cell wall surface anchor family protein.
 
    0.619
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.