STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1744TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fra:Francci3_0794 nitrite reductase (NAD(P)H) large subunit, NirB. (853 aa)    
Predicted Functional Partners:
Acel_1743
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: dge:Dgeo_2392 nitrite reductase (NAD(P)H) large subunit, NirD.
 0.999
Acel_1746
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: fra:Francci3_0863 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.996
Acel_0509
PFAM: molydopterin dinucleotide-binding region; KEGG: sco:SCO0216 nitrate reductase alpha chain NarG2; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.966
Acel_0923
L-glutamine synthetase; KEGG: sma:SAV6005 putative glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
    
 0.964
Acel_1747
PFAM: major facilitator superfamily MFS_1; KEGG: cpe:CPE2274 probable nitrate extrusion protein.
 
 
 0.964
Acel_0505
PFAM: major facilitator superfamily MFS_1; KEGG: cpe:CPE2274 probable nitrate extrusion protein.
 
 
 0.962
Acel_1745
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: nar:Saro_2968 nitrite reductase (NAD(P)H) large subunit, NirB.
 
  
 
0.958
Acel_0508
TIGRFAM: nitrate reductase, beta subunit; KEGG: sco:SCO0217 nitrate reductase beta chain NarH2.
  
 
 0.948
Acel_0506
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: sco:SCO0219 putative nitrate reductase delta chain NarI2.
  
 
 0.934
Acel_1742
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: fra:Francci3_0793 uroporphyrinogen III synthase HEM4.
 
  
 0.929
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.