Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Acel_1758KEGG: fra:Francci3_0768 hypothetical protein. (126 aa)    
Predicted Functional Partners:
Acel_1755
KEGG: fra:Francci3_0770 hypothetical protein.
 
     0.839
Acel_1756
KEGG: fra:Francci3_0769 hypothetical protein.
 
     0.780
Acel_1752
KEGG: fra:Francci3_0773 ATPases involved in chromosome partitioning-like.
  
     0.744
Acel_1753
KEGG: fra:Francci3_0772 hypothetical protein.
  
     0.735
Acel_1734
KEGG: fra:Francci3_0784 hypothetical protein.
  
     0.671
Acel_1754
TIGRFAM: DNA binding domain, excisionase family; KEGG: fra:Francci3_0771 putative transcriptional regulator.
  
     0.653
Acel_1738
PFAM: type II secretion system protein; KEGG: fra:Francci3_0780 type II secretion system protein.
  
     0.640
Acel_1736
KEGG: fra:Francci3_0782 hypothetical protein.
  
     0.625
fbiD
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
     0.594
Acel_1737
PFAM: type II secretion system protein; KEGG: fra:Francci3_0781 type II secretion system protein.
  
     0.573
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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