STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpqBKEGG: tfu:Tfu_2494 hypothetical protein. (575 aa)    
Predicted Functional Partners:
Acel_1764
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sco:SCO3012 putative two-component system histidine kinase.
  
 0.950
Acel_1765
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tfu:Tfu_2496 response regulator receiver.
     
 0.618
Acel_2141
KEGG: tfu:Tfu_3103 hypothetical protein.
  
     0.576
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
  
     0.569
Acel_1981
KEGG: tfu:Tfu_0127 putative integral membrane protein.
  
     0.568
Acel_1762
KEGG: fra:Francci3_0763 amidophosphoribosyltransferases-like.
       0.514
Acel_0868
KEGG: sma:SAV5784 hypothetical protein.
  
     0.509
Acel_0461
KEGG: sma:SAV5044 secreted protein.
 
     0.475
Acel_1148
KEGG: sma:SAV6460 hypothetical protein.
 
     0.448
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.