STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1769PFAM: ABC-1 domain protein; KEGG: fra:Francci3_3788 ABC-1. (451 aa)    
Predicted Functional Partners:
Acel_0067
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: fra:Francci3_0460 transcriptional regulator, XRE family.
  
     0.768
Acel_0489
Methyltransferase type 12; PFAM: Tellurite resistance protein TehB; methyltransferase small; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_0055 hypothetical protein.
   
 
 0.740
Acel_1768
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: fra:Francci3_3787 UBA/ThiF-type NAD/FAD binding fold.
       0.736
Acel_2002
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: fra:Francci3_4279 anion-transporting ATPase; TC 3.A.4.1.1.
  
     0.695
Acel_2001
Arsenite efflux ATP-binding protein ArsA; KEGG: tfu:Tfu_0112 putative ion-transporting ATPase; TC 3.A.4.1.1.
  
     0.681
Acel_2151
PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_4539 conserved hypothetical protein.
  
     0.542
Acel_1531
PFAM: amino acid-binding ACT domain protein; KEGG: fra:Francci3_3646 amino acid-binding ACT.
 
    0.521
Acel_1767
KEGG: fra:Francci3_1839 hypothetical protein.
       0.501
Acel_2063
PFAM: MT-A70 family protein; KEGG: nmu:Nmul_A2608 MT-A70; Belongs to the MT-A70-like family.
    
   0.482
Acel_0484
PFAM: protein of unknown function UPF0089; KEGG: ade:Adeh_2067 hypothetical protein.
 
     0.421
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.