STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1794PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nfa:nfa24510 putative arsenate reductase. (144 aa)    
Predicted Functional Partners:
Acel_1363
PFAM: Glycosyl hydrolase family 32, N terminal domain protein; KEGG: rba:RB5832 hypothetical protein.
  
 
 0.755
Acel_1796
PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sma:SAV3103 hypothetical protein.
       0.619
Acel_1795
PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: sma:SAV3102 putative integral membrane protein.
       0.618
Acel_0542
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ade:Adeh_1608 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.592
Acel_0675
Thioredoxin domain protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: fra:Francci3_3683 thioredoxin-related.
  
 
 0.592
Acel_2149
TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: fra:Francci3_4537 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.592
Acel_1797
KEGG: sma:SAV3104 hypothetical protein.
       0.523
Acel_1792
PFAM: CheW domain protein; KEGG: rpb:RPB_3919 CheW protein.
     
 0.517
Acel_1793
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpb:RPB_3920 CheA-like signal transduction histidine kinase.
       0.511
Acel_1798
Transcriptional regulator, LacI family; PFAM: NUDIX hydrolase; regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tfu:Tfu_0938 regulatory protein, LacI.
     
 0.453
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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