STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acel_1802KEGG: sma:SAV5339 hypothetical protein. (291 aa)    
Predicted Functional Partners:
Acel_1803
5-dehydro-2-deoxygluconokinase; PFAM: PfkB domain protein; KEGG: sco:SCO6978 putative carbohydrate kinase.
    0.982
Acel_1801
5-deoxyglucuronate isomerase; PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sco:SCO6976 IolB protein.
 
    0.944
Acel_1800
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: sma:SAV7147 putative acetolactate synthase.
 
    0.917
Acel_1804
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: sco:SCO6256 transcriptional regulator.
 
     0.865
Acel_1810
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: psp:PSPPH_3187 IolH protein.
 
    0.645
Acel_1816
2-keto-myo-inositol dehydratase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gka:GK1890 myo-inositol catabolism protein.
 
    0.637
Acel_1799
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: tfu:Tfu_0687 methylmalonate-semialdehyde dehydrogenase.
  
    0.587
Acel_1806
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO6979 probable solute-binding lipoprotein; TC 3.A.1.2.-.
 
    0.571
pgk
Phosphoglycerate kinase / triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
 0.538
Acel_1805
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sco:SCO6984 myo-inositol 2-dehydrogenase.
 
     0.426
Your Current Organism:
Acidothermus cellulolyticus
NCBI taxonomy Id: 351607
Other names: A. cellulolyticus 11B, Acidothermus cellulolyticus 11B, Acidothermus cellulolyticus str. 11B, Acidothermus cellulolyticus strain 11B
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